Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.48□□□□□ -0.41
Vps39Q8R5L3 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Gm1335-201ENSMUST00000121653 386 ntBASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Gm7063-201ENSMUST00000186840 981 ntBASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.47□□□□□ -0.41
Vps39Q8R5L3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.47□□□□□ -0.41
Vps39Q8R5L3 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.46□□□□□ -0.41
Vps39Q8R5L3 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Gm4984-201ENSMUST00000115987 360 ntBASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Gm16177-201ENSMUST00000120728 718 ntBASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Gm27682-201ENSMUST00000183930 110 ntBASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Gm27390-201ENSMUST00000184516 176 ntBASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Gm29127-201ENSMUST00000188304 517 ntBASIC12.46□□□□□ -0.41
Vps39Q8R5L3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Gm5904-201ENSMUST00000210286 865 ntBASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms