Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd109Q8R422 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cd109Q8R422 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd109Q8R422 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cd109Q8R422 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Cd109Q8R422 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cd109Q8R422 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cd109Q8R422 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd109Q8R422 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd109Q8R422 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cd109Q8R422 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd109Q8R422 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC17.51■□□□□ 0.39
Cd109Q8R422 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd109Q8R422 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd109Q8R422 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cd109Q8R422 AC126257.1-201ENSMUST00000213195 1536 ntBASIC17.5■□□□□ 0.39
Cd109Q8R422 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC17.5■□□□□ 0.39
Cd109Q8R422 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cd109Q8R422 AC123834.1-201ENSMUST00000225346 2043 ntBASIC17.5■□□□□ 0.39
Cd109Q8R422 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Cd109Q8R422 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC17.5■□□□□ 0.39
Cd109Q8R422 Gm28686-201ENSMUST00000187404 609 ntBASIC17.5■□□□□ 0.39
Cd109Q8R422 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Gm38228-201ENSMUST00000193169 1293 ntBASIC17.5■□□□□ 0.39
Cd109Q8R422 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC17.5■□□□□ 0.39
Cd109Q8R422 AC121960.1-201ENSMUST00000227982 564 ntBASIC17.5■□□□□ 0.39
Cd109Q8R422 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cd109Q8R422 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cd109Q8R422 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd109Q8R422 AC130671.2-201ENSMUST00000227224 1621 ntBASIC17.49■□□□□ 0.39
Cd109Q8R422 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cd109Q8R422 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Cd109Q8R422 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC17.49■□□□□ 0.39
Cd109Q8R422 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC17.49■□□□□ 0.39
Cd109Q8R422 Gm43830-201ENSMUST00000198760 1067 ntBASIC17.49■□□□□ 0.39
Cd109Q8R422 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC17.49■□□□□ 0.39
Cd109Q8R422 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC17.49■□□□□ 0.39
Cd109Q8R422 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cd109Q8R422 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 Gm2420-201ENSMUST00000119864 2149 ntBASIC17.49■□□□□ 0.39
Cd109Q8R422 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cd109Q8R422 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 Gm43267-201ENSMUST00000199664 1796 ntBASIC17.49■□□□□ 0.39
Cd109Q8R422 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Cd109Q8R422 Gm37513-201ENSMUST00000194830 2268 ntBASIC17.49■□□□□ 0.39
Cd109Q8R422 Gm38378-201ENSMUST00000195153 2268 ntBASIC17.49■□□□□ 0.39
Cd109Q8R422 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd109Q8R422 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd109Q8R422 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC17.48■□□□□ 0.39
Cd109Q8R422 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cd109Q8R422 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Cd109Q8R422 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd109Q8R422 Gm15881-201ENSMUST00000148792 942 ntBASIC17.48■□□□□ 0.39
Cd109Q8R422 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC17.48■□□□□ 0.39
Cd109Q8R422 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cd109Q8R422 Gm7593-201ENSMUST00000187246 644 ntBASIC17.48■□□□□ 0.39
Cd109Q8R422 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC17.48■□□□□ 0.39
Cd109Q8R422 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cd109Q8R422 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd109Q8R422 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC17.48■□□□□ 0.39
Cd109Q8R422 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms