Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ddx54Q8K4L0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Gm25076-201ENSMUST00000104098 132 ntBASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Gm11511-201ENSMUST00000118146 540 ntBASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Gm4604-201ENSMUST00000025040 390 ntBASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx54Q8K4L0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Gm12783-201ENSMUST00000121425 397 ntBASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Gm17798-201ENSMUST00000182282 1035 ntBASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 AC122350.1-201ENSMUST00000228135 533 ntBASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx54Q8K4L0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ddx54Q8K4L0 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ddx54Q8K4L0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ddx54Q8K4L0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Gm16166-201ENSMUST00000118291 787 ntBASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Gm21092-201ENSMUST00000178995 955 ntBASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Gm3551-201ENSMUST00000190750 664 ntBASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms