Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Gm7722-201ENSMUST00000120646 741 ntBASIC14.06□□□□□ -0.16
Syne4Q8CII8 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.06□□□□□ -0.16
Syne4Q8CII8 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC14.06□□□□□ -0.16
Syne4Q8CII8 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Gm28686-201ENSMUST00000187404 609 ntBASIC14.06□□□□□ -0.16
Syne4Q8CII8 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Gm17831-201ENSMUST00000205579 900 ntBASIC14.06□□□□□ -0.16
Syne4Q8CII8 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.06□□□□□ -0.16
Syne4Q8CII8 Snora73b-201ENSMUST00000083419 205 ntBASIC14.06□□□□□ -0.16
Syne4Q8CII8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.06□□□□□ -0.16
Syne4Q8CII8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.06□□□□□ -0.16
Syne4Q8CII8 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Syne4Q8CII8 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Gm11956-201ENSMUST00000119525 512 ntBASIC14.05□□□□□ -0.16
Syne4Q8CII8 Gm22144-201ENSMUST00000157402 102 ntBASIC14.05□□□□□ -0.16
Syne4Q8CII8 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.05□□□□□ -0.16
Syne4Q8CII8 AC153505.1-201ENSMUST00000218819 1071 ntBASIC14.05□□□□□ -0.16
Syne4Q8CII8 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.05□□□□□ -0.16
Syne4Q8CII8 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.05□□□□□ -0.16
Syne4Q8CII8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.05□□□□□ -0.16
Syne4Q8CII8 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Syne4Q8CII8 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.04□□□□□ -0.16
Syne4Q8CII8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Gm11892-201ENSMUST00000117711 1202 ntBASIC14.04□□□□□ -0.16
Syne4Q8CII8 Gm14585-201ENSMUST00000120713 634 ntBASIC14.04□□□□□ -0.16
Syne4Q8CII8 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.04□□□□□ -0.16
Syne4Q8CII8 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Gm25072-201ENSMUST00000175233 235 ntBASIC14.04□□□□□ -0.16
Syne4Q8CII8 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Gm2517-201ENSMUST00000215651 348 ntBASIC14.04□□□□□ -0.16
Syne4Q8CII8 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.04□□□□□ -0.16
Syne4Q8CII8 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms