Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Gm17040-202ENSMUST00000170597 889 ntBASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Mir6927-201ENSMUST00000184494 71 ntBASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Gm37666-201ENSMUST00000194110 866 ntBASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Gm18753-201ENSMUST00000201000 566 ntBASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 AC169036.1-201ENSMUST00000227994 296 ntBASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rab11fip3Q8CHD8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Gm5616-201ENSMUST00000165252 384 ntBASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Gm8741-201ENSMUST00000174736 384 ntBASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Mir5120-201ENSMUST00000175020 78 ntBASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Gm9630-201ENSMUST00000178304 885 ntBASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Gm28450-201ENSMUST00000187349 638 ntBASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Rab11fip3Q8CHD8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Gm43138-201ENSMUST00000199123 708 ntBASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 CT025694.1-201ENSMUST00000226188 934 ntBASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Mbnl2-204ENSMUST00000227012 2390 ntBASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip3Q8CHD8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms