Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trim9Q8C7M3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Gm37201-201ENSMUST00000191845 523 ntBASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Gm42937-201ENSMUST00000197360 752 ntBASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Gm44958-201ENSMUST00000203734 736 ntBASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim9Q8C7M3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Gm8227-201ENSMUST00000223306 571 ntBASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Gm9823-201ENSMUST00000051212 327 ntBASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim9Q8C7M3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Gm10434-201ENSMUST00000101158 471 ntBASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Mospd4-201ENSMUST00000180618 576 ntBASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Gm27023-201ENSMUST00000182372 285 ntBASIC13.72□□□□□ -0.21
Trim9Q8C7M3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trim9Q8C7M3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Gm13786-201ENSMUST00000122371 333 ntBASIC13.71□□□□□ -0.21
Trim9Q8C7M3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Gm13570-201ENSMUST00000140763 309 ntBASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.71□□□□□ -0.21
Trim9Q8C7M3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Gm2546-201ENSMUST00000182630 991 ntBASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms