Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Tsen54Q8C2A2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Tsen54Q8C2A2 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Tsen54Q8C2A2 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tsen54Q8C2A2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tsen54Q8C2A2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.46□□□□□ -0.74
Tsen54Q8C2A2 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tsen54Q8C2A2 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Tsen54Q8C2A2 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Tsen54Q8C2A2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Tsen54Q8C2A2 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tsen54Q8C2A2 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tsen54Q8C2A2 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Gm11524-201ENSMUST00000119349 807 ntBASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Gm8515-201ENSMUST00000194852 576 ntBASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Gm19078-201ENSMUST00000206311 727 ntBASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tsen54Q8C2A2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Gm12341-201ENSMUST00000119724 503 ntBASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Tsen54Q8C2A2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms