Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm18061-201ENSMUST00000208350 562 ntBASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Gm18063-201ENSMUST00000208529 568 ntBASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Gm18052-201ENSMUST00000208750 559 ntBASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim47Q8C0E3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Trim47Q8C0E3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.83□□□□□ -0.19
Trim47Q8C0E3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim47Q8C0E3 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.83□□□□□ -0.19
Trim47Q8C0E3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim47Q8C0E3 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim47Q8C0E3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim47Q8C0E3 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.83□□□□□ -0.19
Trim47Q8C0E3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim47Q8C0E3 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trim47Q8C0E3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim47Q8C0E3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim47Q8C0E3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim47Q8C0E3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
Trim47Q8C0E3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Gm18827-201ENSMUST00000188341 790 ntBASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Gm13097-201ENSMUST00000210722 397 ntBASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.83□□□□□ -0.2
Trim47Q8C0E3 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim47Q8C0E3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Mir3102-201ENSMUST00000175555 104 ntBASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.82□□□□□ -0.2
Trim47Q8C0E3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Gm10312-201ENSMUST00000078515 489 ntBASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.82□□□□□ -0.2
Trim47Q8C0E3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms