Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cpsf4Q8BQZ5 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cpsf4Q8BQZ5 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Gm12291-201ENSMUST00000121627 311 ntBASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Gm7809-201ENSMUST00000153199 742 ntBASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Mir339-201ENSMUST00000083659 96 ntBASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cpsf4Q8BQZ5 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cpsf4Q8BQZ5 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.08□□□□□ -0.47
Cpsf4Q8BQZ5 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Gm43118-201ENSMUST00000199149 775 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms