Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 n-R5s84-201ENSMUST00000122591 109 ntBASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 AC129931.1-201ENSMUST00000228865 1861 ntBASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Gm37859-201ENSMUST00000195529 2173 ntBASIC16.04■□□□□ 0.16
Col16a1Q8BLX7 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Gm25545-201ENSMUST00000122673 323 ntBASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 AC124433.1-201ENSMUST00000224483 1063 ntBASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 AC122350.1-201ENSMUST00000228135 533 ntBASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col16a1Q8BLX7 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Gm14942-201ENSMUST00000119642 336 ntBASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Gm11980-201ENSMUST00000121445 986 ntBASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Gm45113-201ENSMUST00000207518 165 ntBASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Gm6722-201ENSMUST00000221586 390 ntBASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col16a1Q8BLX7 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Col16a1Q8BLX7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC16.02■□□□□ 0.15
Col16a1Q8BLX7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col16a1Q8BLX7 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col16a1Q8BLX7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC16.02■□□□□ 0.15
Col16a1Q8BLX7 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col16a1Q8BLX7 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col16a1Q8BLX7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col16a1Q8BLX7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col16a1Q8BLX7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col16a1Q8BLX7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col16a1Q8BLX7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Col16a1Q8BLX7 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col16a1Q8BLX7 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.02■□□□□ 0.15
Col16a1Q8BLX7 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Gm7278-201ENSMUST00000119836 1401 ntBASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Gm29410-201ENSMUST00000188383 694 ntBASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC16.01■□□□□ 0.15
Col16a1Q8BLX7 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms