Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm23218-201ENSMUST00000158124 276 ntBASIC17.4■□□□□ 0.38
Usp54Q8BL06 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC17.4■□□□□ 0.38
Usp54Q8BL06 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Usp54Q8BL06 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp54Q8BL06 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp54Q8BL06 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC17.39■□□□□ 0.38
Usp54Q8BL06 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp54Q8BL06 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp54Q8BL06 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Gm25880-201ENSMUST00000104331 132 ntBASIC17.39■□□□□ 0.37
Usp54Q8BL06 Gm11340-201ENSMUST00000119226 412 ntBASIC17.39■□□□□ 0.37
Usp54Q8BL06 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC17.39■□□□□ 0.37
Usp54Q8BL06 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Gm9192-201ENSMUST00000183221 985 ntBASIC17.39■□□□□ 0.37
Usp54Q8BL06 Gm44506-201ENSMUST00000206278 965 ntBASIC17.39■□□□□ 0.37
Usp54Q8BL06 Gm8342-201ENSMUST00000209839 757 ntBASIC17.39■□□□□ 0.37
Usp54Q8BL06 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Usp54Q8BL06 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC17.39■□□□□ 0.37
Usp54Q8BL06 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Usp54Q8BL06 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp54Q8BL06 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp54Q8BL06 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp54Q8BL06 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp54Q8BL06 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp54Q8BL06 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Usp54Q8BL06 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC17.38■□□□□ 0.37
Usp54Q8BL06 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp54Q8BL06 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp54Q8BL06 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC17.38■□□□□ 0.37
Usp54Q8BL06 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC17.38■□□□□ 0.37
Usp54Q8BL06 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC17.38■□□□□ 0.37
Usp54Q8BL06 Gm45120-201ENSMUST00000208880 408 ntBASIC17.38■□□□□ 0.37
Usp54Q8BL06 Gm2553-201ENSMUST00000215986 605 ntBASIC17.38■□□□□ 0.37
Usp54Q8BL06 CT025553.1-201ENSMUST00000226292 299 ntBASIC17.38■□□□□ 0.37
Usp54Q8BL06 Gm9873-201ENSMUST00000063891 1097 ntBASIC17.38■□□□□ 0.37
Usp54Q8BL06 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp54Q8BL06 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp54Q8BL06 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp54Q8BL06 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp54Q8BL06 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp54Q8BL06 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp54Q8BL06 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp54Q8BL06 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp54Q8BL06 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Gm9630-201ENSMUST00000178304 885 ntBASIC17.37■□□□□ 0.37
Usp54Q8BL06 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Gm28324-201ENSMUST00000187913 264 ntBASIC17.37■□□□□ 0.37
Usp54Q8BL06 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp54Q8BL06 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Gm19166-201ENSMUST00000196041 1063 ntBASIC17.37■□□□□ 0.37
Usp54Q8BL06 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Usp54Q8BL06 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms