Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdhr3Q8BL00 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Gm27331-201ENSMUST00000183705 60 ntBASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Gm32025-201ENSMUST00000217960 307 ntBASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Cdhr3Q8BL00 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Gm12363-201ENSMUST00000122250 668 ntBASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Rmrp-201ENSMUST00000157463 271 ntBASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Auts2-212ENSMUST00000178555 309 ntBASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms