Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Snord83b-201ENSMUST00000104546 94 ntBASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Gm14760-201ENSMUST00000121831 999 ntBASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Gm45384-201ENSMUST00000210451 277 ntBASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Chmp2bQ8BJF9 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp2bQ8BJF9 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Chmp2bQ8BJF9 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp2bQ8BJF9 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.77□□□□□ -0.36
Chmp2bQ8BJF9 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp2bQ8BJF9 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Chmp2bQ8BJF9 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Chmp2bQ8BJF9 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp2bQ8BJF9 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.77□□□□□ -0.36
Chmp2bQ8BJF9 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp2bQ8BJF9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp2bQ8BJF9 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.77□□□□□ -0.36
Chmp2bQ8BJF9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp2bQ8BJF9 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp2bQ8BJF9 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp2bQ8BJF9 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Chmp2bQ8BJF9 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp2bQ8BJF9 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Chmp2bQ8BJF9 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp2bQ8BJF9 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Gm8515-201ENSMUST00000194852 576 ntBASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Gm37497-201ENSMUST00000195830 798 ntBASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Gm9908-201ENSMUST00000211534 448 ntBASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Gm10146-201ENSMUST00000072739 309 ntBASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2bQ8BJF9 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp2bQ8BJF9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp2bQ8BJF9 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Chmp2bQ8BJF9 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp2bQ8BJF9 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp2bQ8BJF9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Chmp2bQ8BJF9 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp2bQ8BJF9 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.76□□□□□ -0.37
Chmp2bQ8BJF9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp2bQ8BJF9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp2bQ8BJF9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Chmp2bQ8BJF9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp2bQ8BJF9 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp2bQ8BJF9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp2bQ8BJF9 Gm14928-201ENSMUST00000120198 477 ntBASIC12.76□□□□□ -0.37
Chmp2bQ8BJF9 Gm11637-201ENSMUST00000120601 592 ntBASIC12.76□□□□□ -0.37
Chmp2bQ8BJF9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp2bQ8BJF9 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms