Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Gm8213-201ENSMUST00000118191 441 ntBASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Gm15703-201ENSMUST00000120250 880 ntBASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Gm12363-201ENSMUST00000122250 668 ntBASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Gm5745-201ENSMUST00000183748 313 ntBASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Gm19184-201ENSMUST00000196798 928 ntBASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf38Q8BI21 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Gm8652-201ENSMUST00000181363 964 ntBASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf38Q8BI21 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rnf38Q8BI21 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf38Q8BI21 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf38Q8BI21 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf38Q8BI21 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.04□□□□□ -0.48
Rnf38Q8BI21 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rnf38Q8BI21 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf38Q8BI21 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf38Q8BI21 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf38Q8BI21 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.04□□□□□ -0.48
Rnf38Q8BI21 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms