Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.24□□□□□ -0.77
Sox21Q811W0 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox21Q811W0 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Sox21Q811W0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox21Q811W0 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.24□□□□□ -0.77
Sox21Q811W0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Sox21Q811W0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sox21Q811W0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox21Q811W0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Sox21Q811W0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox21Q811W0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sox21Q811W0 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.24□□□□□ -0.77
Sox21Q811W0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.24□□□□□ -0.77
Sox21Q811W0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sox21Q811W0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.23□□□□□ -0.77
Sox21Q811W0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.23□□□□□ -0.77
Sox21Q811W0 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.23□□□□□ -0.77
Sox21Q811W0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.23□□□□□ -0.77
Sox21Q811W0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Pck2-205ENSMUST00000226352 2784 ntBASIC10.23□□□□□ -0.77
Sox21Q811W0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.23□□□□□ -0.77
Sox21Q811W0 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.23□□□□□ -0.77
Sox21Q811W0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.23□□□□□ -0.77
Sox21Q811W0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Sox21Q811W0 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.23□□□□□ -0.77
Sox21Q811W0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.23□□□□□ -0.77
Sox21Q811W0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Sox21Q811W0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.23□□□□□ -0.77
Sox21Q811W0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.23□□□□□ -0.77
Sox21Q811W0 Mir5132-201ENSMUST00000175166 71 ntBASIC10.23□□□□□ -0.77
Sox21Q811W0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.23□□□□□ -0.77
Sox21Q811W0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.23□□□□□ -0.77
Sox21Q811W0 Gm19931-201ENSMUST00000198920 368 ntBASIC10.23□□□□□ -0.77
Sox21Q811W0 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.23□□□□□ -0.77
Sox21Q811W0 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Sox21Q811W0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.23□□□□□ -0.77
Sox21Q811W0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.23□□□□□ -0.77
Sox21Q811W0 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.23□□□□□ -0.77
Sox21Q811W0 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.23□□□□□ -0.77
Sox21Q811W0 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.23□□□□□ -0.77
Sox21Q811W0 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Sox21Q811W0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Sox21Q811W0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Sox21Q811W0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Sox21Q811W0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.23□□□□□ -0.77
Sox21Q811W0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sox21Q811W0 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.23□□□□□ -0.77
Sox21Q811W0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Sox21Q811W0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Sox21Q811W0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Sox21Q811W0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Sox21Q811W0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Sox21Q811W0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Sox21Q811W0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.22□□□□□ -0.77
Sox21Q811W0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sox21Q811W0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.22□□□□□ -0.77
Sox21Q811W0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.22□□□□□ -0.77
Sox21Q811W0 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.22□□□□□ -0.77
Sox21Q811W0 Gm11222-201ENSMUST00000119005 738 ntBASIC10.22□□□□□ -0.77
Sox21Q811W0 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms