Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Usp6nlQ80XC3 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Usp6nlQ80XC3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Gm24231-201ENSMUST00000104315 133 ntBASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Gm13035-201ENSMUST00000117496 342 ntBASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Gm23119-201ENSMUST00000158610 140 ntBASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Gm18038-201ENSMUST00000197900 485 ntBASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Usp6nlQ80XC3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Gm22133-201ENSMUST00000102082 109 ntBASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Gm12165-201ENSMUST00000117047 342 ntBASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Gm43962-201ENSMUST00000203898 190 ntBASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Gm270-201ENSMUST00000223010 976 ntBASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.76□□□□□ -0.21
Usp6nlQ80XC3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Gm24934-201ENSMUST00000103764 111 ntBASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Gm14058-201ENSMUST00000116082 735 ntBASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Gm11941-201ENSMUST00000119904 610 ntBASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms