Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Gm15824-201ENSMUST00000119516 955 ntBASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Gm9630-201ENSMUST00000178304 885 ntBASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Gm19184-201ENSMUST00000196798 928 ntBASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Gm18062-201ENSMUST00000208020 547 ntBASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Gm18055-201ENSMUST00000208254 547 ntBASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ctdp1Q7TSG2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Gm4984-201ENSMUST00000115987 360 ntBASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Gm5687-201ENSMUST00000118252 640 ntBASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Gm13612-201ENSMUST00000119276 390 ntBASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Gm12291-201ENSMUST00000121627 311 ntBASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Gm38671-201ENSMUST00000200573 130 ntBASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ctdp1Q7TSG2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Ctdp1Q7TSG2 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ctdp1Q7TSG2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.58□□□□□ -0.23
Ctdp1Q7TSG2 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.58□□□□□ -0.23
Ctdp1Q7TSG2 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Ctdp1Q7TSG2 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ctdp1Q7TSG2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ctdp1Q7TSG2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ctdp1Q7TSG2 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ctdp1Q7TSG2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ctdp1Q7TSG2 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ctdp1Q7TSG2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ctdp1Q7TSG2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.58□□□□□ -0.24
Ctdp1Q7TSG2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ctdp1Q7TSG2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ctdp1Q7TSG2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ctdp1Q7TSG2 Gm13829-201ENSMUST00000119600 138 ntBASIC13.58□□□□□ -0.24
Ctdp1Q7TSG2 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.58□□□□□ -0.24
Ctdp1Q7TSG2 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ctdp1Q7TSG2 Gm6152-201ENSMUST00000151704 340 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms