Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.65□□□□□ -0.38
Casc4Q6P2L7 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.65□□□□□ -0.38
Casc4Q6P2L7 Gm7399-201ENSMUST00000032395 858 ntBASIC12.65□□□□□ -0.38
Casc4Q6P2L7 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Casc4Q6P2L7 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Casc4Q6P2L7 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.65□□□□□ -0.38
Casc4Q6P2L7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Casc4Q6P2L7 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Casc4Q6P2L7 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Casc4Q6P2L7 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Casc4Q6P2L7 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Casc4Q6P2L7 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Casc4Q6P2L7 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Casc4Q6P2L7 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.65□□□□□ -0.39
Casc4Q6P2L7 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Casc4Q6P2L7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.65□□□□□ -0.39
Casc4Q6P2L7 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Casc4Q6P2L7 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.65□□□□□ -0.39
Casc4Q6P2L7 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Casc4Q6P2L7 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Gm27516-201ENSMUST00000184237 98 ntBASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Casc4Q6P2L7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Casc4Q6P2L7 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.62□□□□□ -0.39
Casc4Q6P2L7 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms