Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slx4Q6P1D7 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slx4Q6P1D7 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Gm13022-201ENSMUST00000121181 285 ntBASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Gm18463-201ENSMUST00000207258 474 ntBASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Gm18460-201ENSMUST00000208088 464 ntBASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Gm19640-201ENSMUST00000214849 464 ntBASIC18.84■□□□□ 0.61
Slx4Q6P1D7 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Gm44942-201ENSMUST00000096093 2072 ntBASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slx4Q6P1D7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slx4Q6P1D7 Gm28323-201ENSMUST00000186817 2499 ntBASIC18.83■□□□□ 0.61
Slx4Q6P1D7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slx4Q6P1D7 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slx4Q6P1D7 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Slx4Q6P1D7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Slx4Q6P1D7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slx4Q6P1D7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slx4Q6P1D7 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Slx4Q6P1D7 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Slx4Q6P1D7 Gm38151-201ENSMUST00000195085 289 ntBASIC18.83■□□□□ 0.6
Slx4Q6P1D7 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC18.83■□□□□ 0.6
Slx4Q6P1D7 Ap3s1-202ENSMUST00000224622 978 ntBASIC18.83■□□□□ 0.6
Slx4Q6P1D7 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Slx4Q6P1D7 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Slx4Q6P1D7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slx4Q6P1D7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Slx4Q6P1D7 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC18.83■□□□□ 0.6
Slx4Q6P1D7 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slx4Q6P1D7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slx4Q6P1D7 Gm18782-201ENSMUST00000209023 1399 ntBASIC18.83■□□□□ 0.6
Slx4Q6P1D7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slx4Q6P1D7 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 AC126257.1-201ENSMUST00000213195 1536 ntBASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Mir6923-201ENSMUST00000184592 72 ntBASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Gm8342-201ENSMUST00000209839 757 ntBASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Mt1-202ENSMUST00000211807 1085 ntBASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Slx4Q6P1D7 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Gm3017-201ENSMUST00000203603 1126 ntBASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Gm44506-201ENSMUST00000206278 965 ntBASIC18.81■□□□□ 0.6
Slx4Q6P1D7 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Gm45266-201ENSMUST00000210111 2173 ntBASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Gm25766-201ENSMUST00000104101 131 ntBASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC18.81■□□□□ 0.6
Slx4Q6P1D7 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms