Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Gm2231-201ENSMUST00000125661 612 ntBASIC10.48□□□□□ -0.73
SspnQ62147 Gm23363-201ENSMUST00000175024 79 ntBASIC10.48□□□□□ -0.73
SspnQ62147 Gm27839-201ENSMUST00000184242 106 ntBASIC10.48□□□□□ -0.73
SspnQ62147 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.48□□□□□ -0.73
SspnQ62147 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.48□□□□□ -0.73
SspnQ62147 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.48□□□□□ -0.73
SspnQ62147 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.48□□□□□ -0.73
SspnQ62147 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SspnQ62147 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.48□□□□□ -0.73
SspnQ62147 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.48□□□□□ -0.73
SspnQ62147 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.48□□□□□ -0.73
SspnQ62147 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.48□□□□□ -0.73
SspnQ62147 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SspnQ62147 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SspnQ62147 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SspnQ62147 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.48□□□□□ -0.73
SspnQ62147 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.48□□□□□ -0.73
SspnQ62147 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SspnQ62147 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SspnQ62147 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SspnQ62147 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SspnQ62147 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
SspnQ62147 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SspnQ62147 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SspnQ62147 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SspnQ62147 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SspnQ62147 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SspnQ62147 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SspnQ62147 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SspnQ62147 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SspnQ62147 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SspnQ62147 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.48□□□□□ -0.73
SspnQ62147 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SspnQ62147 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.48□□□□□ -0.73
SspnQ62147 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SspnQ62147 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.48□□□□□ -0.73
SspnQ62147 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SspnQ62147 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SspnQ62147 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SspnQ62147 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
SspnQ62147 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Gm37447-201ENSMUST00000195625 2928 ntBASIC10.47□□□□□ -0.73
SspnQ62147 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Gm12490-201ENSMUST00000120255 560 ntBASIC10.47□□□□□ -0.73
SspnQ62147 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.47□□□□□ -0.73
SspnQ62147 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.47□□□□□ -0.73
SspnQ62147 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Gm8652-201ENSMUST00000181363 964 ntBASIC10.47□□□□□ -0.73
SspnQ62147 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.47□□□□□ -0.73
SspnQ62147 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.47□□□□□ -0.73
SspnQ62147 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.47□□□□□ -0.73
SspnQ62147 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.47□□□□□ -0.73
SspnQ62147 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.47□□□□□ -0.73
SspnQ62147 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.47□□□□□ -0.73
SspnQ62147 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
SspnQ62147 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.47□□□□□ -0.73
SspnQ62147 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.47□□□□□ -0.73
SspnQ62147 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
SspnQ62147 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.47□□□□□ -0.73
SspnQ62147 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.47□□□□□ -0.73
SspnQ62147 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SspnQ62147 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SspnQ62147 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SspnQ62147 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SspnQ62147 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.46□□□□□ -0.73
SspnQ62147 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SspnQ62147 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
SspnQ62147 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
SspnQ62147 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.46□□□□□ -0.73
SspnQ62147 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
SspnQ62147 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SspnQ62147 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SspnQ62147 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SspnQ62147 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SspnQ62147 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms