Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col12a1Q60847 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Col12a1Q60847 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Gm13700-201ENSMUST00000118624 1128 ntBASIC11.98□□□□□ -0.49
Col12a1Q60847 Gm5419-201ENSMUST00000119301 527 ntBASIC11.98□□□□□ -0.49
Col12a1Q60847 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Col12a1Q60847 Gm30671-201ENSMUST00000214898 318 ntBASIC11.98□□□□□ -0.49
Col12a1Q60847 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.98□□□□□ -0.49
Col12a1Q60847 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.98□□□□□ -0.49
Col12a1Q60847 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.98□□□□□ -0.49
Col12a1Q60847 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Gm14807-201ENSMUST00000116640 983 ntBASIC11.98□□□□□ -0.49
Col12a1Q60847 Gm13117-201ENSMUST00000120894 691 ntBASIC11.98□□□□□ -0.49
Col12a1Q60847 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Col12a1Q60847 Gm24809-201ENSMUST00000175318 271 ntBASIC11.98□□□□□ -0.49
Col12a1Q60847 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Col12a1Q60847 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.98□□□□□ -0.49
Col12a1Q60847 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.98□□□□□ -0.49
Col12a1Q60847 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Col12a1Q60847 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.98□□□□□ -0.49
Col12a1Q60847 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Col12a1Q60847 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Col12a1Q60847 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col12a1Q60847 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 Gm4775-201ENSMUST00000169588 402 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 Gm44506-201ENSMUST00000206278 965 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 AC121357.1-201ENSMUST00000227365 608 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Col12a1Q60847 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.97□□□□□ -0.49
Col12a1Q60847 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Col12a1Q60847 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 Gm4310-201ENSMUST00000177847 889 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 Gm37782-201ENSMUST00000194879 678 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 Gm5451-201ENSMUST00000080545 579 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.97□□□□□ -0.49
Col12a1Q60847 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Col12a1Q60847 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.97□□□□□ -0.49
Col12a1Q60847 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Gm11957-201ENSMUST00000118304 779 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 Gm14270-201ENSMUST00000118388 846 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Gm24078-201ENSMUST00000158184 103 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Gm27956-201ENSMUST00000175604 260 ntBASIC11.97□□□□□ -0.49
Col12a1Q60847 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC11.97□□□□□ -0.49
Col12a1Q60847 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Col12a1Q60847 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Col12a1Q60847 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col12a1Q60847 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms