Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim38Q5SZ99 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trim38Q5SZ99 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim38Q5SZ99 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.95□□□□□ -0.34
Trim38Q5SZ99 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim38Q5SZ99 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim38Q5SZ99 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim38Q5SZ99 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.95□□□□□ -0.34
Trim38Q5SZ99 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim38Q5SZ99 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.95□□□□□ -0.34
Trim38Q5SZ99 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim38Q5SZ99 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim38Q5SZ99 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim38Q5SZ99 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim38Q5SZ99 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim38Q5SZ99 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim38Q5SZ99 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Gm27243-201ENSMUST00000183964 521 ntBASIC12.94□□□□□ -0.34
Trim38Q5SZ99 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Snora73a-201ENSMUST00000082453 205 ntBASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim38Q5SZ99 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Gm13315-201ENSMUST00000120376 991 ntBASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Gm11597-201ENSMUST00000121423 964 ntBASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Gm24548-201ENSMUST00000158650 108 ntBASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Gm6222-202ENSMUST00000182143 629 ntBASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Gm44405-201ENSMUST00000198952 126 ntBASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.93□□□□□ -0.34
Trim38Q5SZ99 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.93□□□□□ -0.34
Trim38Q5SZ99 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms