Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm13813-201ENSMUST00000120998 787 ntBASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Gm19208-201ENSMUST00000213861 912 ntBASIC13.28□□□□□ -0.28
Shroom1Q5SX79 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.28□□□□□ -0.28
Shroom1Q5SX79 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Shroom1Q5SX79 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shroom1Q5SX79 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.27□□□□□ -0.28
Shroom1Q5SX79 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shroom1Q5SX79 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Shroom1Q5SX79 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Shroom1Q5SX79 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shroom1Q5SX79 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shroom1Q5SX79 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shroom1Q5SX79 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.27□□□□□ -0.28
Shroom1Q5SX79 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shroom1Q5SX79 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.27□□□□□ -0.29
Shroom1Q5SX79 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shroom1Q5SX79 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Gm13996-201ENSMUST00000118456 430 ntBASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Gm14277-201ENSMUST00000121195 360 ntBASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Gm10312-201ENSMUST00000078515 489 ntBASIC13.26□□□□□ -0.29
Shroom1Q5SX79 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms