Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Gm27839-201ENSMUST00000184242 106 ntBASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vmn1r223Q5SSA0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Gm14921-201ENSMUST00000118643 908 ntBASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vmn1r223Q5SSA0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Vmn1r223Q5SSA0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vmn1r223Q5SSA0 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vmn1r223Q5SSA0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Vmn1r223Q5SSA0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vmn1r223Q5SSA0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.92□□□□□ -0.66
Vmn1r223Q5SSA0 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.92□□□□□ -0.66
Vmn1r223Q5SSA0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms