Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm27838-201ENSMUST00000184829 128 ntBASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm43514-201ENSMUST00000198852 424 ntBASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm14132-201ENSMUST00000117188 1719 ntBASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm12384-201ENSMUST00000119228 919 ntBASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm29667-201ENSMUST00000190817 490 ntBASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm31326-201ENSMUST00000191856 1048 ntBASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 AC154517.2-201ENSMUST00000220829 2458 ntBASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav15-1-dv6-1Q5R1D2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms