Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3-3Q5R1C3 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Gm2213-201ENSMUST00000197485 688 ntBASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Gm4971-201ENSMUST00000205991 1108 ntBASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 AC140397.2-201ENSMUST00000224213 834 ntBASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3-3Q5R1C3 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gm45667-201ENSMUST00000210380 1316 ntBASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gm12585-201ENSMUST00000117307 290 ntBASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gm15460-201ENSMUST00000118147 391 ntBASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gm15693-201ENSMUST00000120470 637 ntBASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gm15393-201ENSMUST00000120499 219 ntBASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gm25911-201ENSMUST00000157621 56 ntBASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gm24513-201ENSMUST00000174964 138 ntBASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gm27397-201ENSMUST00000184997 107 ntBASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gm43474-201ENSMUST00000196415 774 ntBASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav3-3Q5R1C3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms