Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Gm37008-201ENSMUST00000195712 319 ntBASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Gm25007-201ENSMUST00000083808 133 ntBASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rnf20Q5DTM8 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.83□□□□□ -0.03
Rnf20Q5DTM8 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf20Q5DTM8 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf20Q5DTM8 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Rnf20Q5DTM8 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf20Q5DTM8 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf20Q5DTM8 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.03
Rnf20Q5DTM8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Gm13736-201ENSMUST00000119272 253 ntBASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Gm18558-201ENSMUST00000186253 1214 ntBASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf20Q5DTM8 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Mir1247-201ENSMUST00000116706 82 ntBASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Gm12314-201ENSMUST00000118104 538 ntBASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.82□□□□□ -0.04
Rnf20Q5DTM8 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms