Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Gm15371-201ENSMUST00000117057 784 ntBASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.7□□□□□ -0.54
Trim40Q3UWA4 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim40Q3UWA4 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Mir339-201ENSMUST00000083659 96 ntBASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim40Q3UWA4 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.68□□□□□ -0.54
Trim40Q3UWA4 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim40Q3UWA4 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms