Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl5Q3UTQ8 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl5Q3UTQ8 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl5Q3UTQ8 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cdkl5Q3UTQ8 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl5Q3UTQ8 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl5Q3UTQ8 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl5Q3UTQ8 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkl5Q3UTQ8 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Gm12058-201ENSMUST00000118614 437 ntBASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Gm38002-201ENSMUST00000193255 180 ntBASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 AY702102-202ENSMUST00000194651 1173 ntBASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdkl5Q3UTQ8 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Gm23119-201ENSMUST00000158610 140 ntBASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Gm37201-201ENSMUST00000191845 523 ntBASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdkl5Q3UTQ8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.41□□□□□ -0.1
Cdkl5Q3UTQ8 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 167.2 ms