Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Gm7541-201ENSMUST00000118361 535 ntBASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Gm16071-201ENSMUST00000119589 793 ntBASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Gm8737-201ENSMUST00000122208 642 ntBASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.53□□□□□ -0.4
Fam196aQ3USH1 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Gm17826-201ENSMUST00000189720 798 ntBASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Gm42657-201ENSMUST00000201746 211 ntBASIC12.53□□□□□ -0.4
Fam196aQ3USH1 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Gm19009-201ENSMUST00000223072 823 ntBASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Fam196aQ3USH1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Fam196aQ3USH1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fam196aQ3USH1 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fam196aQ3USH1 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fam196aQ3USH1 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fam196aQ3USH1 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.52□□□□□ -0.4
Fam196aQ3USH1 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.52□□□□□ -0.4
Fam196aQ3USH1 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fam196aQ3USH1 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fam196aQ3USH1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fam196aQ3USH1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fam196aQ3USH1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fam196aQ3USH1 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.52□□□□□ -0.4
Fam196aQ3USH1 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fam196aQ3USH1 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Fam196aQ3USH1 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Gm8343-201ENSMUST00000182705 994 ntBASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.52□□□□□ -0.41
Fam196aQ3USH1 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Gm6722-201ENSMUST00000221586 390 ntBASIC12.52□□□□□ -0.41
Fam196aQ3USH1 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Fam196aQ3USH1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fam196aQ3USH1 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Fam196aQ3USH1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fam196aQ3USH1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Fam196aQ3USH1 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fam196aQ3USH1 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Fam196aQ3USH1 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.51□□□□□ -0.41
Fam196aQ3USH1 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fam196aQ3USH1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Fam196aQ3USH1 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Fam196aQ3USH1 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.51□□□□□ -0.41
Fam196aQ3USH1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Fam196aQ3USH1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fam196aQ3USH1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fam196aQ3USH1 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fam196aQ3USH1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Fam196aQ3USH1 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fam196aQ3USH1 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.51□□□□□ -0.41
Fam196aQ3USH1 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Fam196aQ3USH1 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms