Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.15□□□□□ -0.3
Nlrc4Q3UP24 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Nlrc4Q3UP24 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Gm9083-201ENSMUST00000120423 819 ntBASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nlrc4Q3UP24 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Pck2-205ENSMUST00000226352 2784 ntBASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Gm28882-201ENSMUST00000185504 314 ntBASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Gm8712-201ENSMUST00000221090 701 ntBASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nlrc4Q3UP24 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 1102.4 ms