Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Spg11Q3UHA3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Spg11Q3UHA3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Spg11Q3UHA3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Spg11Q3UHA3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Spg11Q3UHA3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Spg11Q3UHA3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Spg11Q3UHA3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Spg11Q3UHA3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Spg11Q3UHA3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Spg11Q3UHA3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Spg11Q3UHA3 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Spg11Q3UHA3 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Gm42430-201ENSMUST00000197209 616 ntBASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Gm9797-202ENSMUST00000218003 294 ntBASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Gm11560-201ENSMUST00000117567 948 ntBASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Gm12736-201ENSMUST00000119330 236 ntBASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Gm13204-201ENSMUST00000120110 821 ntBASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Gm13117-201ENSMUST00000120894 691 ntBASIC11.41□□□□□ -0.58
Spg11Q3UHA3 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Gm18304-201ENSMUST00000189162 546 ntBASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Gm39288-201ENSMUST00000210554 446 ntBASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Spg11Q3UHA3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm23400-201ENSMUST00000174994 102 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm26463-201ENSMUST00000175065 101 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm24332-201ENSMUST00000175102 102 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm25959-201ENSMUST00000175112 102 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm22475-201ENSMUST00000175169 102 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm22903-201ENSMUST00000175193 102 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm25070-201ENSMUST00000175237 102 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm24159-201ENSMUST00000175264 102 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm25299-201ENSMUST00000175283 102 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm23798-201ENSMUST00000175560 102 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm23802-201ENSMUST00000175565 102 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm25708-201ENSMUST00000177687 102 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm24370-201ENSMUST00000178007 102 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm23049-201ENSMUST00000178068 102 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm28019-201ENSMUST00000178138 101 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm25571-201ENSMUST00000178322 102 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm25355-201ENSMUST00000178456 101 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm24975-201ENSMUST00000178492 101 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm23189-201ENSMUST00000178954 102 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm25100-201ENSMUST00000179750 101 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm23064-201ENSMUST00000179866 101 ntBASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Spg11Q3UHA3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Spg11Q3UHA3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms