Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.69□□□□□ -0.06
Limch1Q3UH68 Gm17376-201ENSMUST00000166016 84 ntBASIC14.69□□□□□ -0.06
Limch1Q3UH68 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Limch1Q3UH68 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.69□□□□□ -0.06
Limch1Q3UH68 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Limch1Q3UH68 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Limch1Q3UH68 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Limch1Q3UH68 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.69□□□□□ -0.06
Limch1Q3UH68 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Limch1Q3UH68 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Limch1Q3UH68 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Limch1Q3UH68 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.69□□□□□ -0.06
Limch1Q3UH68 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Limch1Q3UH68 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Limch1Q3UH68 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Limch1Q3UH68 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Limch1Q3UH68 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Limch1Q3UH68 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Limch1Q3UH68 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Limch1Q3UH68 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Limch1Q3UH68 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Limch1Q3UH68 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.68□□□□□ -0.06
Limch1Q3UH68 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Limch1Q3UH68 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Limch1Q3UH68 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Limch1Q3UH68 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Limch1Q3UH68 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.68□□□□□ -0.06
Limch1Q3UH68 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Limch1Q3UH68 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.68□□□□□ -0.06
Limch1Q3UH68 Gm25668-201ENSMUST00000157700 129 ntBASIC14.68□□□□□ -0.06
Limch1Q3UH68 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Limch1Q3UH68 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Limch1Q3UH68 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Limch1Q3UH68 Mir433-201ENSMUST00000093564 124 ntBASIC14.68□□□□□ -0.06
Limch1Q3UH68 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Limch1Q3UH68 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.68□□□□□ -0.06
Limch1Q3UH68 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Limch1Q3UH68 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Limch1Q3UH68 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Limch1Q3UH68 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.67□□□□□ -0.06
Limch1Q3UH68 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.67□□□□□ -0.06
Limch1Q3UH68 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.67□□□□□ -0.06
Limch1Q3UH68 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Gm24548-201ENSMUST00000158650 108 ntBASIC14.67□□□□□ -0.06
Limch1Q3UH68 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.67□□□□□ -0.06
Limch1Q3UH68 Gm18584-201ENSMUST00000203098 964 ntBASIC14.67□□□□□ -0.06
Limch1Q3UH68 Gm6082-201ENSMUST00000215204 454 ntBASIC14.67□□□□□ -0.06
Limch1Q3UH68 Gm5781-201ENSMUST00000219792 443 ntBASIC14.67□□□□□ -0.06
Limch1Q3UH68 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.67□□□□□ -0.06
Limch1Q3UH68 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.67□□□□□ -0.06
Limch1Q3UH68 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.67□□□□□ -0.06
Limch1Q3UH68 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Limch1Q3UH68 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Limch1Q3UH68 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.66□□□□□ -0.06
Limch1Q3UH68 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Limch1Q3UH68 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Limch1Q3UH68 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Limch1Q3UH68 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Limch1Q3UH68 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.66□□□□□ -0.06
Limch1Q3UH68 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Limch1Q3UH68 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Limch1Q3UH68 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.66□□□□□ -0.06
Limch1Q3UH68 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Limch1Q3UH68 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Limch1Q3UH68 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Limch1Q3UH68 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Limch1Q3UH68 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.66□□□□□ -0.06
Limch1Q3UH68 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.66□□□□□ -0.06
Limch1Q3UH68 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.66□□□□□ -0.06
Limch1Q3UH68 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Limch1Q3UH68 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms