Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Brf2Q3UAW9 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Gm11591-201ENSMUST00000120063 702 ntBASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Gm16379-201ENSMUST00000161469 348 ntBASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Gm8738-201ENSMUST00000172606 329 ntBASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Gm8018-201ENSMUST00000173536 789 ntBASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Gm45784-201ENSMUST00000188360 142 ntBASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Gm8762-201ENSMUST00000193486 339 ntBASIC11.74□□□□□ -0.53
Brf2Q3UAW9 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Gm5781-201ENSMUST00000219792 443 ntBASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Brf2Q3UAW9 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Gm5745-201ENSMUST00000183748 313 ntBASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Gm6007-201ENSMUST00000208170 823 ntBASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Gm45925-201ENSMUST00000218882 744 ntBASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Gm45930-201ENSMUST00000221330 292 ntBASIC11.73□□□□□ -0.53
Brf2Q3UAW9 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.73□□□□□ -0.53
Brf2Q3UAW9 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms