Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf180Q3U827 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf180Q3U827 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf180Q3U827 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf180Q3U827 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf180Q3U827 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf180Q3U827 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf180Q3U827 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Rnf180Q3U827 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf180Q3U827 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf180Q3U827 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Gm23604-201ENSMUST00000104311 132 ntBASIC14.45□□□□□ -0.1
Rnf180Q3U827 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Gm42655-201ENSMUST00000202782 1134 ntBASIC14.45□□□□□ -0.1
Rnf180Q3U827 Gm8574-201ENSMUST00000203207 924 ntBASIC14.45□□□□□ -0.1
Rnf180Q3U827 Gm44216-201ENSMUST00000203942 157 ntBASIC14.45□□□□□ -0.1
Rnf180Q3U827 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC14.45□□□□□ -0.1
Rnf180Q3U827 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC14.45□□□□□ -0.1
Rnf180Q3U827 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf180Q3U827 AC153152.3-201ENSMUST00000222188 1135 ntBASIC14.45□□□□□ -0.1
Rnf180Q3U827 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.45□□□□□ -0.1
Rnf180Q3U827 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf180Q3U827 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf180Q3U827 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf180Q3U827 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC14.44□□□□□ -0.1
Rnf180Q3U827 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Gm2553-201ENSMUST00000215986 605 ntBASIC14.44□□□□□ -0.1
Rnf180Q3U827 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Gm19046-201ENSMUST00000221263 1298 ntBASIC14.44□□□□□ -0.1
Rnf180Q3U827 Gm8181-201ENSMUST00000062242 669 ntBASIC14.44□□□□□ -0.1
Rnf180Q3U827 Gm23105-201ENSMUST00000083719 134 ntBASIC14.44□□□□□ -0.1
Rnf180Q3U827 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf180Q3U827 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.44□□□□□ -0.1
Rnf180Q3U827 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Rnf180Q3U827 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf180Q3U827 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.43□□□□□ -0.1
Rnf180Q3U827 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.43□□□□□ -0.1
Rnf180Q3U827 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf180Q3U827 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.43□□□□□ -0.1
Rnf180Q3U827 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rnf180Q3U827 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.43□□□□□ -0.1
Rnf180Q3U827 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf180Q3U827 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC14.43□□□□□ -0.1
Rnf180Q3U827 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
Rnf180Q3U827 Gm39288-201ENSMUST00000210554 446 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms