Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Q3U1D9 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.85□□□□□ -0.67
Q3U1D9 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Rps4l-202ENSMUST00000204242 789 ntBASIC10.85□□□□□ -0.67
Q3U1D9 Gm45186-201ENSMUST00000206874 478 ntBASIC10.85□□□□□ -0.67
Q3U1D9 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.85□□□□□ -0.67
Q3U1D9 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Q3U1D9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Q3U1D9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.85□□□□□ -0.67
Q3U1D9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.85□□□□□ -0.67
Q3U1D9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Q3U1D9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Q3U1D9 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Q3U1D9 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.84□□□□□ -0.67
Q3U1D9 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.84□□□□□ -0.67
Q3U1D9 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.84□□□□□ -0.67
Q3U1D9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.84□□□□□ -0.67
Q3U1D9 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Gm12015-201ENSMUST00000117065 843 ntBASIC10.84□□□□□ -0.67
Q3U1D9 Gm11439-201ENSMUST00000118598 409 ntBASIC10.84□□□□□ -0.67
Q3U1D9 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.84□□□□□ -0.67
Q3U1D9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.84□□□□□ -0.67
Q3U1D9 Gm6963-201ENSMUST00000147879 379 ntBASIC10.84□□□□□ -0.67
Q3U1D9 Gm18827-201ENSMUST00000188341 790 ntBASIC10.84□□□□□ -0.67
Q3U1D9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Gm32999-201ENSMUST00000192693 562 ntBASIC10.84□□□□□ -0.67
Q3U1D9 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.84□□□□□ -0.67
Q3U1D9 Gm19187-201ENSMUST00000206781 892 ntBASIC10.84□□□□□ -0.67
Q3U1D9 Gm45598-202ENSMUST00000210719 986 ntBASIC10.84□□□□□ -0.67
Q3U1D9 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.84□□□□□ -0.67
Q3U1D9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.84□□□□□ -0.67
Q3U1D9 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Q3U1D9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Q3U1D9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Q3U1D9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Q3U1D9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Q3U1D9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Q3U1D9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.84□□□□□ -0.67
Q3U1D9 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.84□□□□□ -0.67
Q3U1D9 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Q3U1D9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Q3U1D9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.83□□□□□ -0.68
Q3U1D9 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.83□□□□□ -0.68
Q3U1D9 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Q3U1D9 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Q3U1D9 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms