Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Gm12957-201ENSMUST00000117835 377 ntBASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Gm11793-201ENSMUST00000120433 981 ntBASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Gm8062-201ENSMUST00000139696 444 ntBASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 AY702102-202ENSMUST00000194651 1173 ntBASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdnep1Q3TP92 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Gm13786-201ENSMUST00000122371 333 ntBASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Gm13570-201ENSMUST00000140763 309 ntBASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Gm44958-201ENSMUST00000203734 736 ntBASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdnep1Q3TP92 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Mir1247-201ENSMUST00000116706 82 ntBASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Gm25043-201ENSMUST00000158604 212 ntBASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Gm2546-201ENSMUST00000182630 991 ntBASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Gm18062-201ENSMUST00000208020 547 ntBASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Gm18055-201ENSMUST00000208254 547 ntBASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Gm5950-201ENSMUST00000213337 772 ntBASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdnep1Q3TP92 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms