Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cul4aQ3TCH7 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.08□□□□□ -0.31
Cul4aQ3TCH7 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cul4aQ3TCH7 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.31
Cul4aQ3TCH7 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cul4aQ3TCH7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Gm13315-201ENSMUST00000120376 991 ntBASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Gm27486-201ENSMUST00000184923 80 ntBASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cul4aQ3TCH7 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Gm27847-201ENSMUST00000183711 107 ntBASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Gm27375-201ENSMUST00000183799 107 ntBASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Gm6091-201ENSMUST00000098307 165 ntBASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cul4aQ3TCH7 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Cul4aQ3TCH7 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms