Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm25694-201ENSMUST00000175448 282 ntBASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Gm4895-201ENSMUST00000181646 1137 ntBASIC6.37□□□□□ -1.39
Ush2AQ2QI47 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 5330411J11Rik-201ENSMUST00000137162 1635 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ush2AQ2QI47 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gm22937-201ENSMUST00000103954 131 ntBASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gm8163-201ENSMUST00000122020 1060 ntBASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gm8828-201ENSMUST00000196786 1290 ntBASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Zkscan7-205ENSMUST00000216462 990 ntBASIC6.36□□□□□ -1.39
Ush2AQ2QI47 AC140314.1-201ENSMUST00000219549 554 ntBASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 AC158986.2-201ENSMUST00000227487 618 ntBASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gm15197-201ENSMUST00000120526 478 ntBASIC6.36□□□□□ -1.39
Ush2AQ2QI47 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gm7445-201ENSMUST00000192115 340 ntBASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gm37688-201ENSMUST00000195195 465 ntBASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gm9771-201ENSMUST00000198267 1137 ntBASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 AC163038.2-201ENSMUST00000224851 650 ntBASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gm3945-201ENSMUST00000196637 683 ntBASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Fbxl12-205ENSMUST00000140702 1555 ntBASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gm40332-201ENSMUST00000199847 938 ntBASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Gm6478-201ENSMUST00000099450 742 ntBASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms