Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna5Q2MKA5 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna5Q2MKA5 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna5Q2MKA5 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna5Q2MKA5 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Chrna5Q2MKA5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna5Q2MKA5 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Gm26286-201ENSMUST00000104166 134 ntBASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Gm14585-201ENSMUST00000120713 634 ntBASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Gm9358-201ENSMUST00000183067 927 ntBASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna5Q2MKA5 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Gm11246-201ENSMUST00000120880 345 ntBASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Mir8115-201ENSMUST00000184992 119 ntBASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Gm28324-201ENSMUST00000187913 264 ntBASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Gm5852-201ENSMUST00000194119 1021 ntBASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Gm37028-201ENSMUST00000194276 107 ntBASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Gm5542-201ENSMUST00000195485 1089 ntBASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Gm9797-202ENSMUST00000218003 294 ntBASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Matn2-206ENSMUST00000228570 2798 ntBASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chrna5Q2MKA5 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna5Q2MKA5 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna5Q2MKA5 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.73□□□□□ -0.05
Chrna5Q2MKA5 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.73□□□□□ -0.05
Chrna5Q2MKA5 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna5Q2MKA5 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna5Q2MKA5 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna5Q2MKA5 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna5Q2MKA5 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna5Q2MKA5 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna5Q2MKA5 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chrna5Q2MKA5 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Chrna5Q2MKA5 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Chrna5Q2MKA5 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.73□□□□□ -0.05
Chrna5Q2MKA5 Gm23771-201ENSMUST00000178702 110 ntBASIC14.73□□□□□ -0.05
Chrna5Q2MKA5 Mir7076-201ENSMUST00000183519 74 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms