Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Gm24844-201ENSMUST00000158679 127 ntBASIC11.11□□□□□ -0.63
Chd8Q09XV5 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Chd8Q09XV5 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC11.11□□□□□ -0.63
Chd8Q09XV5 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd8Q09XV5 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.1□□□□□ -0.63
Chd8Q09XV5 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Gm24294-201ENSMUST00000158295 277 ntBASIC11.1□□□□□ -0.63
Chd8Q09XV5 Gm6216-201ENSMUST00000182390 687 ntBASIC11.1□□□□□ -0.63
Chd8Q09XV5 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.1□□□□□ -0.63
Chd8Q09XV5 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Gm28833-201ENSMUST00000189671 559 ntBASIC11.1□□□□□ -0.63
Chd8Q09XV5 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Gm44506-201ENSMUST00000206278 965 ntBASIC11.1□□□□□ -0.63
Chd8Q09XV5 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Chd8Q09XV5 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.09□□□□□ -0.63
Chd8Q09XV5 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Gm26286-201ENSMUST00000104166 134 ntBASIC11.09□□□□□ -0.63
Chd8Q09XV5 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.09□□□□□ -0.63
Chd8Q09XV5 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.09□□□□□ -0.63
Chd8Q09XV5 BC080696-201ENSMUST00000202858 1218 ntBASIC11.09□□□□□ -0.63
Chd8Q09XV5 Gm2448-201ENSMUST00000207080 559 ntBASIC11.09□□□□□ -0.63
Chd8Q09XV5 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.09□□□□□ -0.63
Chd8Q09XV5 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Cacna2d3-208ENSMUST00000225985 918 ntBASIC11.09□□□□□ -0.63
Chd8Q09XV5 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Chd8Q09XV5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.09□□□□□ -0.63
Chd8Q09XV5 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Chd8Q09XV5 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms