Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Sox9Q04887 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.89□□□□□ -0.35
Sox9Q04887 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox9Q04887 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Sox9Q04887 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox9Q04887 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox9Q04887 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox9Q04887 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox9Q04887 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox9Q04887 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox9Q04887 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox9Q04887 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Sox9Q04887 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox9Q04887 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox9Q04887 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.89□□□□□ -0.35
Sox9Q04887 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox9Q04887 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.88□□□□□ -0.35
Sox9Q04887 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.88□□□□□ -0.35
Sox9Q04887 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Sox9Q04887 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.88□□□□□ -0.35
Sox9Q04887 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Gm11956-201ENSMUST00000119525 512 ntBASIC12.88□□□□□ -0.35
Sox9Q04887 Gm8199-201ENSMUST00000121323 823 ntBASIC12.88□□□□□ -0.35
Sox9Q04887 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.88□□□□□ -0.35
Sox9Q04887 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.88□□□□□ -0.35
Sox9Q04887 Gm42937-201ENSMUST00000197360 752 ntBASIC12.88□□□□□ -0.35
Sox9Q04887 Gm2965-201ENSMUST00000198365 343 ntBASIC12.88□□□□□ -0.35
Sox9Q04887 Gm19931-201ENSMUST00000198920 368 ntBASIC12.88□□□□□ -0.35
Sox9Q04887 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.88□□□□□ -0.35
Sox9Q04887 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.88□□□□□ -0.35
Sox9Q04887 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Sox9Q04887 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.88□□□□□ -0.35
Sox9Q04887 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.88□□□□□ -0.35
Sox9Q04887 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Sox9Q04887 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.88□□□□□ -0.35
Sox9Q04887 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.88□□□□□ -0.35
Sox9Q04887 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox9Q04887 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.87□□□□□ -0.35
Sox9Q04887 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.87□□□□□ -0.35
Sox9Q04887 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.87□□□□□ -0.35
Sox9Q04887 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sox9Q04887 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sox9Q04887 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.87□□□□□ -0.35
Sox9Q04887 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.87□□□□□ -0.35
Sox9Q04887 Gm14724-201ENSMUST00000118400 537 ntBASIC12.87□□□□□ -0.35
Sox9Q04887 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Gm19994-201ENSMUST00000217086 586 ntBASIC12.87□□□□□ -0.35
Sox9Q04887 Gm9139-201ENSMUST00000218817 700 ntBASIC12.87□□□□□ -0.35
Sox9Q04887 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sox9Q04887 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Sox9Q04887 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Sox9Q04887 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox9Q04887 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms