Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.35□□□□□ -0.27
VcpQ01853 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
VcpQ01853 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
VcpQ01853 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
VcpQ01853 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
VcpQ01853 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
VcpQ01853 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.34□□□□□ -0.27
VcpQ01853 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
VcpQ01853 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.34□□□□□ -0.27
VcpQ01853 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.34□□□□□ -0.27
VcpQ01853 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.34□□□□□ -0.27
VcpQ01853 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 Gm31256-201ENSMUST00000194705 506 ntBASIC13.34□□□□□ -0.27
VcpQ01853 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
VcpQ01853 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
VcpQ01853 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
VcpQ01853 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.34□□□□□ -0.27
VcpQ01853 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
VcpQ01853 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.34□□□□□ -0.27
VcpQ01853 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
VcpQ01853 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.34□□□□□ -0.27
VcpQ01853 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VcpQ01853 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
VcpQ01853 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
VcpQ01853 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.33□□□□□ -0.27
VcpQ01853 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
VcpQ01853 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VcpQ01853 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
VcpQ01853 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
VcpQ01853 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcpQ01853 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcpQ01853 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcpQ01853 Gm11637-201ENSMUST00000120601 592 ntBASIC13.33□□□□□ -0.28
VcpQ01853 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.33□□□□□ -0.28
VcpQ01853 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VcpQ01853 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.33□□□□□ -0.28
VcpQ01853 Gm17208-201ENSMUST00000168388 535 ntBASIC13.33□□□□□ -0.28
VcpQ01853 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VcpQ01853 Gm37042-201ENSMUST00000193816 581 ntBASIC13.33□□□□□ -0.28
VcpQ01853 Gm38317-201ENSMUST00000195564 343 ntBASIC13.33□□□□□ -0.28
VcpQ01853 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.33□□□□□ -0.28
VcpQ01853 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.33□□□□□ -0.28
VcpQ01853 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcpQ01853 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcpQ01853 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcpQ01853 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcpQ01853 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcpQ01853 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.33□□□□□ -0.28
VcpQ01853 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcpQ01853 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
VcpQ01853 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcpQ01853 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
VcpQ01853 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.33□□□□□ -0.28
VcpQ01853 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcpQ01853 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcpQ01853 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcpQ01853 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VcpQ01853 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VcpQ01853 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VcpQ01853 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcpQ01853 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.32□□□□□ -0.28
VcpQ01853 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
VcpQ01853 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcpQ01853 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcpQ01853 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcpQ01853 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcpQ01853 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcpQ01853 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
VcpQ01853 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcpQ01853 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VcpQ01853 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.32□□□□□ -0.28
VcpQ01853 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms