Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.13□□□□□ -0.15
GabpaQ00422 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
GabpaQ00422 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GabpaQ00422 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GabpaQ00422 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GabpaQ00422 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GabpaQ00422 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.12□□□□□ -0.15
GabpaQ00422 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GabpaQ00422 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GabpaQ00422 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GabpaQ00422 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.12□□□□□ -0.15
GabpaQ00422 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GabpaQ00422 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GabpaQ00422 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GabpaQ00422 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
GabpaQ00422 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
GabpaQ00422 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
GabpaQ00422 Gm11989-201ENSMUST00000117240 672 ntBASIC14.12□□□□□ -0.15
GabpaQ00422 Gm11362-201ENSMUST00000118838 850 ntBASIC14.12□□□□□ -0.15
GabpaQ00422 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.12□□□□□ -0.15
GabpaQ00422 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GabpaQ00422 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.12□□□□□ -0.15
GabpaQ00422 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.12□□□□□ -0.15
GabpaQ00422 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GabpaQ00422 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GabpaQ00422 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GabpaQ00422 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.12□□□□□ -0.15
GabpaQ00422 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GabpaQ00422 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GabpaQ00422 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
GabpaQ00422 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
GabpaQ00422 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GabpaQ00422 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.12□□□□□ -0.15
GabpaQ00422 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.12□□□□□ -0.15
GabpaQ00422 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
GabpaQ00422 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.11□□□□□ -0.15
GabpaQ00422 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
GabpaQ00422 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
GabpaQ00422 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.11□□□□□ -0.15
GabpaQ00422 Gm15711-201ENSMUST00000118889 535 ntBASIC14.11□□□□□ -0.15
GabpaQ00422 Gm12176-201ENSMUST00000121420 875 ntBASIC14.11□□□□□ -0.15
GabpaQ00422 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
GabpaQ00422 Gm18734-201ENSMUST00000172937 808 ntBASIC14.11□□□□□ -0.15
GabpaQ00422 Mir3547-201ENSMUST00000175461 88 ntBASIC14.11□□□□□ -0.15
GabpaQ00422 Gm27627-201ENSMUST00000183644 150 ntBASIC14.11□□□□□ -0.15
GabpaQ00422 Gm7848-201ENSMUST00000210739 718 ntBASIC14.11□□□□□ -0.15
GabpaQ00422 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
GabpaQ00422 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
GabpaQ00422 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GabpaQ00422 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GabpaQ00422 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GabpaQ00422 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GabpaQ00422 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GabpaQ00422 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GabpaQ00422 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GabpaQ00422 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GabpaQ00422 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GabpaQ00422 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.1□□□□□ -0.15
GabpaQ00422 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GabpaQ00422 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GabpaQ00422 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
GabpaQ00422 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GabpaQ00422 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
GabpaQ00422 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.1□□□□□ -0.15
GabpaQ00422 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GabpaQ00422 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GabpaQ00422 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
GabpaQ00422 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.1□□□□□ -0.15
GabpaQ00422 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GabpaQ00422 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.1□□□□□ -0.15
GabpaQ00422 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms