Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.66□□□□□ -0.38
Gabpb1Q00420 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.66□□□□□ -0.38
Gabpb1Q00420 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Gm44882-201ENSMUST00000205702 802 ntBASIC12.66□□□□□ -0.38
Gabpb1Q00420 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.66□□□□□ -0.38
Gabpb1Q00420 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.66□□□□□ -0.38
Gabpb1Q00420 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.66□□□□□ -0.38
Gabpb1Q00420 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Gabpb1Q00420 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.65□□□□□ -0.38
Gabpb1Q00420 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Gm23119-201ENSMUST00000158610 140 ntBASIC12.65□□□□□ -0.38
Gabpb1Q00420 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Mir7085-201ENSMUST00000184353 66 ntBASIC12.65□□□□□ -0.38
Gabpb1Q00420 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.65□□□□□ -0.38
Gabpb1Q00420 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Gabpb1Q00420 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.65□□□□□ -0.39
Gabpb1Q00420 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.65□□□□□ -0.39
Gabpb1Q00420 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Gabpb1Q00420 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Gabpb1Q00420 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Gm13342-201ENSMUST00000121055 207 ntBASIC12.64□□□□□ -0.39
Gabpb1Q00420 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.64□□□□□ -0.39
Gabpb1Q00420 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Gm27514-201ENSMUST00000183692 110 ntBASIC12.64□□□□□ -0.39
Gabpb1Q00420 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms