Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.53□□□□□ -0.56
Cacna1aP97445 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cacna1aP97445 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cacna1aP97445 Gm15711-201ENSMUST00000118889 535 ntBASIC11.53□□□□□ -0.56
Cacna1aP97445 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 Gm12196-201ENSMUST00000120954 262 ntBASIC11.53□□□□□ -0.56
Cacna1aP97445 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.53□□□□□ -0.56
Cacna1aP97445 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.53□□□□□ -0.56
Cacna1aP97445 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.53□□□□□ -0.56
Cacna1aP97445 Gm19091-201ENSMUST00000208120 978 ntBASIC11.53□□□□□ -0.56
Cacna1aP97445 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC11.53□□□□□ -0.56
Cacna1aP97445 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cacna1aP97445 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.53□□□□□ -0.56
Cacna1aP97445 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cacna1aP97445 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cacna1aP97445 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cacna1aP97445 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Cacna1aP97445 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cacna1aP97445 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cacna1aP97445 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cacna1aP97445 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cacna1aP97445 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cacna1aP97445 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cacna1aP97445 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC11.52□□□□□ -0.57
Cacna1aP97445 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.52□□□□□ -0.57
Cacna1aP97445 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cacna1aP97445 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.52□□□□□ -0.57
Cacna1aP97445 Gm42937-201ENSMUST00000197360 752 ntBASIC11.52□□□□□ -0.57
Cacna1aP97445 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cacna1aP97445 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cacna1aP97445 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Cacna1aP97445 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cacna1aP97445 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cacna1aP97445 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cacna1aP97445 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cacna1aP97445 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cacna1aP97445 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cacna1aP97445 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cacna1aP97445 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cacna1aP97445 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cacna1aP97445 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cacna1aP97445 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cacna1aP97445 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cacna1aP97445 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cacna1aP97445 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cacna1aP97445 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.52□□□□□ -0.57
Cacna1aP97445 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cacna1aP97445 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.52□□□□□ -0.57
Cacna1aP97445 Gm4862-201ENSMUST00000170405 438 ntBASIC11.52□□□□□ -0.57
Cacna1aP97445 Gm27530-201ENSMUST00000184096 98 ntBASIC11.52□□□□□ -0.57
Cacna1aP97445 Gm9230-201ENSMUST00000188228 532 ntBASIC11.52□□□□□ -0.57
Cacna1aP97445 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cacna1aP97445 Gm6722-201ENSMUST00000221586 390 ntBASIC11.52□□□□□ -0.57
Cacna1aP97445 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cacna1aP97445 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cacna1aP97445 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cacna1aP97445 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cacna1aP97445 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cacna1aP97445 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.51□□□□□ -0.57
Cacna1aP97445 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Cacna1aP97445 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cacna1aP97445 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.51□□□□□ -0.57
Cacna1aP97445 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.51□□□□□ -0.57
Cacna1aP97445 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.51□□□□□ -0.57
Cacna1aP97445 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.51□□□□□ -0.57
Cacna1aP97445 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.51□□□□□ -0.57
Cacna1aP97445 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.51□□□□□ -0.57
Cacna1aP97445 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cacna1aP97445 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms