Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.59■□□□□ 0.09
Nkx2-3P97334 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC15.59■□□□□ 0.09
Nkx2-3P97334 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Nkx2-3P97334 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-3P97334 Gm38116-201ENSMUST00000193873 1533 ntBASIC15.58■□□□□ 0.09
Nkx2-3P97334 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nkx2-3P97334 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nkx2-3P97334 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nkx2-3P97334 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Nkx2-3P97334 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nkx2-3P97334 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nkx2-3P97334 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Nkx2-3P97334 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nkx2-3P97334 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-3P97334 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-3P97334 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-3P97334 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-3P97334 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-3P97334 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Nkx2-3P97334 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Nkx2-3P97334 Gm15573-201ENSMUST00000119487 540 ntBASIC15.58■□□□□ 0.08
Nkx2-3P97334 Gm8100-201ENSMUST00000182906 988 ntBASIC15.58■□□□□ 0.08
Nkx2-3P97334 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Nkx2-3P97334 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC15.58■□□□□ 0.08
Nkx2-3P97334 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-3P97334 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC15.58■□□□□ 0.08
Nkx2-3P97334 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC15.58■□□□□ 0.08
Nkx2-3P97334 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-3P97334 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-3P97334 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Nkx2-3P97334 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC15.58■□□□□ 0.08
Nkx2-3P97334 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-3P97334 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-3P97334 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-3P97334 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-3P97334 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-3P97334 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-3P97334 AC154671.1-201ENSMUST00000228617 1578 ntBASIC15.58■□□□□ 0.08
Nkx2-3P97334 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.57■□□□□ 0.08
Nkx2-3P97334 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Gm14724-201ENSMUST00000118400 537 ntBASIC15.57■□□□□ 0.08
Nkx2-3P97334 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC15.57■□□□□ 0.08
Nkx2-3P97334 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Gm28686-201ENSMUST00000187404 609 ntBASIC15.57■□□□□ 0.08
Nkx2-3P97334 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Gm37102-201ENSMUST00000195740 1105 ntBASIC15.57■□□□□ 0.08
Nkx2-3P97334 Gm18893-201ENSMUST00000198416 943 ntBASIC15.57■□□□□ 0.08
Nkx2-3P97334 Gm43930-201ENSMUST00000203868 845 ntBASIC15.57■□□□□ 0.08
Nkx2-3P97334 Gm4157-201ENSMUST00000211647 679 ntBASIC15.57■□□□□ 0.08
Nkx2-3P97334 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Gm10179-201ENSMUST00000086233 688 ntBASIC15.57■□□□□ 0.08
Nkx2-3P97334 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms