Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC8.21□□□□□ -1.1
PrkdcP97313 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
PrkdcP97313 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PrkdcP97313 Gm10176-201ENSMUST00000159707 2264 ntBASIC8.2□□□□□ -1.1
PrkdcP97313 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PrkdcP97313 CT025603.1-201ENSMUST00000224040 448 ntBASIC8.2□□□□□ -1.1
PrkdcP97313 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
PrkdcP97313 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PrkdcP97313 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PrkdcP97313 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PrkdcP97313 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
PrkdcP97313 Gm37795-201ENSMUST00000194216 2459 ntBASIC8.2□□□□□ -1.1
PrkdcP97313 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
PrkdcP97313 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
PrkdcP97313 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PrkdcP97313 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PrkdcP97313 Gm2594-201ENSMUST00000214774 742 ntBASIC8.2□□□□□ -1.1
PrkdcP97313 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
PrkdcP97313 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PrkdcP97313 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC8.2□□□□□ -1.1
PrkdcP97313 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
PrkdcP97313 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PrkdcP97313 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PrkdcP97313 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
PrkdcP97313 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC8.2□□□□□ -1.1
PrkdcP97313 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
PrkdcP97313 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PrkdcP97313 Matn2-206ENSMUST00000228570 2798 ntBASIC8.2□□□□□ -1.1
PrkdcP97313 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
PrkdcP97313 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC8.2□□□□□ -1.1
PrkdcP97313 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PrkdcP97313 Gm15815-201ENSMUST00000120569 255 ntBASIC8.2□□□□□ -1.1
PrkdcP97313 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC8.2□□□□□ -1.1
PrkdcP97313 AC126257.1-201ENSMUST00000213195 1536 ntBASIC8.2□□□□□ -1.1
PrkdcP97313 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PrkdcP97313 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PrkdcP97313 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
PrkdcP97313 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PrkdcP97313 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
PrkdcP97313 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
PrkdcP97313 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Gm23062-201ENSMUST00000102349 110 ntBASIC8.19□□□□□ -1.1
PrkdcP97313 Gm13281-201ENSMUST00000120871 567 ntBASIC8.19□□□□□ -1.1
PrkdcP97313 Gm27444-201ENSMUST00000184157 137 ntBASIC8.19□□□□□ -1.1
PrkdcP97313 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC8.19□□□□□ -1.1
PrkdcP97313 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Gm9487-201ENSMUST00000216600 472 ntBASIC8.19□□□□□ -1.1
PrkdcP97313 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC8.19□□□□□ -1.1
PrkdcP97313 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
PrkdcP97313 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
PrkdcP97313 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
PrkdcP97313 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
PrkdcP97313 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Gm12274-201ENSMUST00000120062 385 ntBASIC8.19□□□□□ -1.1
PrkdcP97313 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC8.19□□□□□ -1.1
PrkdcP97313 Gm27440-201ENSMUST00000184785 107 ntBASIC8.19□□□□□ -1.1
PrkdcP97313 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC8.19□□□□□ -1.1
PrkdcP97313 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Gm18782-201ENSMUST00000209023 1399 ntBASIC8.19□□□□□ -1.1
PrkdcP97313 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Gm15374-201ENSMUST00000119313 844 ntBASIC8.19□□□□□ -1.1
PrkdcP97313 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC8.19□□□□□ -1.1
PrkdcP97313 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC8.19□□□□□ -1.1
PrkdcP97313 Gm7940-201ENSMUST00000218195 769 ntBASIC8.19□□□□□ -1.1
PrkdcP97313 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC8.19□□□□□ -1.1
PrkdcP97313 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PrkdcP97313 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
PrkdcP97313 Gm16547-201ENSMUST00000159474 293 ntBASIC8.18□□□□□ -1.1
PrkdcP97313 Gm44605-201ENSMUST00000206892 949 ntBASIC8.18□□□□□ -1.1
PrkdcP97313 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms