Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.12□□□□□ -0.63
H3f3aP84244 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
H3f3aP84244 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H3f3aP84244 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.11□□□□□ -0.63
H3f3aP84244 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Gm15370-201ENSMUST00000117158 253 ntBASIC11.11□□□□□ -0.63
H3f3aP84244 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.11□□□□□ -0.63
H3f3aP84244 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.11□□□□□ -0.63
H3f3aP84244 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.11□□□□□ -0.63
H3f3aP84244 Gm2546-201ENSMUST00000182630 991 ntBASIC11.11□□□□□ -0.63
H3f3aP84244 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.11□□□□□ -0.63
H3f3aP84244 Gm27243-201ENSMUST00000183964 521 ntBASIC11.11□□□□□ -0.63
H3f3aP84244 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.11□□□□□ -0.63
H3f3aP84244 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.11□□□□□ -0.63
H3f3aP84244 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.11□□□□□ -0.63
H3f3aP84244 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.11□□□□□ -0.63
H3f3aP84244 Gm5950-201ENSMUST00000213337 772 ntBASIC11.11□□□□□ -0.63
H3f3aP84244 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.11□□□□□ -0.63
H3f3aP84244 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.11□□□□□ -0.63
H3f3aP84244 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Gm10076-201ENSMUST00000073238 384 ntBASIC11.11□□□□□ -0.63
H3f3aP84244 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
H3f3aP84244 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.11□□□□□ -0.63
H3f3aP84244 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
H3f3aP84244 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
H3f3aP84244 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
H3f3aP84244 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
H3f3aP84244 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.11□□□□□ -0.63
H3f3aP84244 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H3f3aP84244 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.1□□□□□ -0.63
H3f3aP84244 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
H3f3aP84244 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
H3f3aP84244 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
H3f3aP84244 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
H3f3aP84244 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.1□□□□□ -0.63
H3f3aP84244 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.1□□□□□ -0.63
H3f3aP84244 Gm23119-201ENSMUST00000158610 140 ntBASIC11.1□□□□□ -0.63
H3f3aP84244 Mir1938-201ENSMUST00000158746 100 ntBASIC11.1□□□□□ -0.63
H3f3aP84244 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.1□□□□□ -0.63
H3f3aP84244 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.1□□□□□ -0.63
H3f3aP84244 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
H3f3aP84244 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.1□□□□□ -0.63
H3f3aP84244 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.1□□□□□ -0.63
H3f3aP84244 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.1□□□□□ -0.63
H3f3aP84244 Gm39404-201ENSMUST00000216350 313 ntBASIC11.1□□□□□ -0.63
H3f3aP84244 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
H3f3aP84244 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
H3f3aP84244 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.1□□□□□ -0.63
H3f3aP84244 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.1□□□□□ -0.63
H3f3aP84244 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
H3f3aP84244 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.1□□□□□ -0.63
H3f3aP84244 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
H3f3aP84244 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
H3f3aP84244 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.1□□□□□ -0.63
H3f3aP84244 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3aP84244 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3aP84244 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.09□□□□□ -0.63
H3f3aP84244 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.09□□□□□ -0.63
H3f3aP84244 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3aP84244 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H3f3aP84244 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms