Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcaP82350 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.47□□□□□ -0.73
SgcaP82350 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SgcaP82350 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.47□□□□□ -0.73
SgcaP82350 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcaP82350 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcaP82350 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcaP82350 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcaP82350 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.47□□□□□ -0.73
SgcaP82350 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcaP82350 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcaP82350 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcaP82350 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcaP82350 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SgcaP82350 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
SgcaP82350 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SgcaP82350 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SgcaP82350 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcaP82350 Gm9630-201ENSMUST00000178304 885 ntBASIC10.47□□□□□ -0.73
SgcaP82350 Gm17837-201ENSMUST00000186435 985 ntBASIC10.47□□□□□ -0.73
SgcaP82350 Gm37277-201ENSMUST00000194052 1111 ntBASIC10.47□□□□□ -0.73
SgcaP82350 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.47□□□□□ -0.73
SgcaP82350 AC165157.4-201ENSMUST00000220587 139 ntBASIC10.47□□□□□ -0.73
SgcaP82350 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.47□□□□□ -0.73
SgcaP82350 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.47□□□□□ -0.73
SgcaP82350 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SgcaP82350 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.47□□□□□ -0.73
SgcaP82350 Gm26315-201ENSMUST00000083890 321 ntBASIC10.47□□□□□ -0.73
SgcaP82350 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
SgcaP82350 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.47□□□□□ -0.73
SgcaP82350 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.47□□□□□ -0.73
SgcaP82350 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SgcaP82350 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
SgcaP82350 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SgcaP82350 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SgcaP82350 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcaP82350 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
SgcaP82350 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcaP82350 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcaP82350 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SgcaP82350 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.73
SgcaP82350 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.46□□□□□ -0.73
SgcaP82350 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
SgcaP82350 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcaP82350 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.46□□□□□ -0.73
SgcaP82350 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.46□□□□□ -0.73
SgcaP82350 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
SgcaP82350 Gm37447-201ENSMUST00000195625 2928 ntBASIC10.46□□□□□ -0.73
SgcaP82350 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SgcaP82350 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
SgcaP82350 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcaP82350 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcaP82350 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcaP82350 Gm23935-201ENSMUST00000102303 57 ntBASIC10.46□□□□□ -0.73
SgcaP82350 Gm24270-201ENSMUST00000102326 57 ntBASIC10.46□□□□□ -0.73
SgcaP82350 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcaP82350 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.46□□□□□ -0.73
SgcaP82350 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.46□□□□□ -0.73
SgcaP82350 Gm24245-201ENSMUST00000157318 57 ntBASIC10.46□□□□□ -0.73
SgcaP82350 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
SgcaP82350 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SgcaP82350 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.46□□□□□ -0.73
SgcaP82350 Gm27680-201ENSMUST00000184192 160 ntBASIC10.46□□□□□ -0.73
SgcaP82350 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.46□□□□□ -0.73
SgcaP82350 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcaP82350 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcaP82350 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcaP82350 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcaP82350 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.46□□□□□ -0.73
SgcaP82350 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
SgcaP82350 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SgcaP82350 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
SgcaP82350 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SgcaP82350 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SgcaP82350 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
SgcaP82350 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SgcaP82350 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
SgcaP82350 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SgcaP82350 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.46□□□□□ -0.74
SgcaP82350 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SgcaP82350 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.46□□□□□ -0.74
SgcaP82350 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.46□□□□□ -0.74
SgcaP82350 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SgcaP82350 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
SgcaP82350 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SgcaP82350 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.46□□□□□ -0.74
SgcaP82350 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SgcaP82350 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
SgcaP82350 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SgcaP82350 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
SgcaP82350 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
SgcaP82350 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcaP82350 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcaP82350 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.45□□□□□ -0.74
SgcaP82350 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.45□□□□□ -0.74
SgcaP82350 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SgcaP82350 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.45□□□□□ -0.74
SgcaP82350 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcaP82350 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcaP82350 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms